There's a glitch in the atheist origins narrative that you may not be aware of: did the four habits herb, vine, shrub and tree evolve before, or after, the differentiation of flower structure?
Primitive or Advanced?
Cladistic phylogenetic analysis works by grouping species based on shared derived characteristics (synapomorphies). All of the members of a homologous group have a common ancestor.
Archaeopteris (Dawson): A case study in the applicability of phylogenetic analysis to fossil taxa
Cladistic phylogenetic analysis is circular reasoning based on personal bias.
The Fifth Day
We don't have any problem with the process of evolution. We would even go so far as to say that speciation happens. Let's face it, Noah's Ark was only so big.
